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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
snap_masked-scaffold02766-abinit-gene-0.16-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
bHLH |
Protein Properties |
Length: 337aa MW: 38050.6 Da PI: 6.1925 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
snap_masked-scaffold02766-abinit-gene-0.16-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 39.4 | 1.1e-12 | 182 | 228 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
h ++ErrRR+++ ++f L ++P + kK++Ka++L +A++Y+k+Lq
snap_masked-scaffold02766-abinit-gene-0.16-mRNA-1 182 DHIIAERRRREKLSERFIALSAIVPGL-----KKMDKASVLGEAINYVKELQ 228
699************************.....9******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 337 aa
Download sequence Send
to blast |
MEISSAKWLS ELGMDEYNYI HQSHMNTLDG FTTHEMATAM VENFQQSLSS ESYSSYPTFT 60 KKATTTFSNT SAETSQRPAK QPKTNSWDSY ITDHVSPKPS SSSHILSFEN SISMLTNPQE 120 FYGSHDSSLK LNNEMVSQAN IHFPPLISKD SFENQDYARK ASLQGIKRTY SSMTRNPSNA 180 QDHIIAERRR REKLSERFIA LSAIVPGLKK MDKASVLGEA INYVKELQER IKLFEEQTKK 240 RTVESVVFVK KSQLSADDDT SSCNENSDNH SDEALLEIEA RISEKDVLIR IHCEKQKGAI 300 VKILSEIEKL NLTVVNSSVL PFGNSTIDIT IIAQEFI
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 186 | 191 | ERRRRE |
2 | 187 | 192 | RRRREK |