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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
snap_masked-scaffold01324-abinit-gene-0.21-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
MYB |
Protein Properties |
Length: 198aa MW: 22869.2 Da PI: 9.597 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
snap_masked-scaffold01324-abinit-gene-0.21-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 55.1 | 1.8e-17 | 55 | 99 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
W++ Ed ll +vk++ g+ Wk Ia++++ gRt+ qc ++wqk+l
snap_masked-scaffold01324-abinit-gene-0.21-mRNA-1 55 GWSEKEDNLLSALVKKYNGKKWKQIAAHIP-GRTDVQCLHHWQKVL 99
6*****************************.************986 PP
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2 | Myb_DNA-binding | 59.5 | 7.5e-19 | 105 | 151 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd+ +++ vk +G ++W++Ia+ ++ gR +kqc++rw+++l
snap_masked-scaffold01324-abinit-gene-0.21-mRNA-1 105 KGSWTKEEDDCIIEFVKNYGCKRWSLIAKNLP-GRIGKQCRERWFNHL 151
799*****************************.*************97 PP
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3 | Myb_DNA-binding | 33.3 | 1.1e-10 | 157 | 189 | 1 | 35 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgR 35
+++WT+eE+ ++ +++++G++ W+ Iar ++ gR
snap_masked-scaffold01324-abinit-gene-0.21-mRNA-1 157 KDAWTEEEESVIAYYHHKYGNK-WAQIARFLP-GR 189
689*******************.*********.99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 198 aa
Download sequence Send
to blast |
MVKVKKEKEE LAANSAKEVQ FASCSLQSCG NCDTPVLRCS VIGRPTGPTR RSRRGWSEKE 60 DNLLSALVKK YNGKKWKQIA AHIPGRTDVQ CLHHWQKVLN PEVVKGSWTK EEDDCIIEFV 120 KNYGCKRWSL IAKNLPGRIG KQCRERWFNH LDPAINKDAW TEEEESVIAY YHHKYGNKWA 180 QIARFLPGRY VSEINVLQ
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds 5'-AACGG-3' motifs in gene promoters (By similarity). Transcription repressor that regulates organ growth. Binds to the promoters of G2/M-specific genes and to E2F target genes to prevent their expression in post-mitotic cells and to restrict the time window of their expression in proliferating cells (PubMed:26069325). {ECO:0000250|UniProtKB:Q94FL9, ECO:0000269|PubMed:26069325}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Slightly induced by ethylene and salicylic acid (SA). {ECO:0000269|PubMed:16463103}. |