PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | orange1.1g048456m | ||||||||
Common Name | CISIN_1g048456mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bZIP | ||||||||
Protein Properties | Length: 212aa MW: 23531.5 Da PI: 8.4373 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 26.7 | 1.2e-08 | 111 | 165 | 5 | 59 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 kr +r+ NR++A+rsR+R +a++e+L++++++ ea + L +++++ e++ l orange1.1g048456m 111 KRMKRLLANRVSAQRSRLRNLAYMEKLKKEIDNEEARLSVLLPLVSHYETECKVL 165 99*****************************999988888888888888888766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.6E-6 | 107 | 171 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.6E-8 | 111 | 166 | No hit | No description |
Pfam | PF00170 | 7.2E-7 | 111 | 142 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.69E-8 | 111 | 165 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 114 | 129 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence Send to blast |
MLNRTRSFSS SSGISMENLA SLRRSASDSL ALMSSTNVIK IGVGDNFSFE GDVETRKGDD 60 DNNNNNHLNY SSDKKPSSAN NEVRALTPID SSSKIEPQKS VASNDHGKGP KRMKRLLANR 120 VSAQRSRLRN LAYMEKLKKE IDNEEARLSV LLPLVSHYET ECKVLGKMNR EMKEMMEALE 180 NETAAKEAEF QALMEEKEAL GLAYRLLGEG K* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015386694.1 | 1e-151 | basic leucine zipper 34-like | ||||
TrEMBL | A0A067ESA5 | 1e-150 | A0A067ESA5_CITSI; Uncharacterized protein | ||||
STRING | EOY07119 | 5e-18 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM18651 | 6 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42380.2 | 2e-16 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | orange1.1g048456m |