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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
orange1.1g047949m |
| Common Name | CISIN_1g047949mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
NAC |
| Protein Properties |
Length: 389aa MW: 44191.9 Da PI: 6.8562 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| orange1.1g047949m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 114.2 | 1.3e-35 | 5 | 132 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
+GfrF Ptdee++ + Lk k + +++ ++ike+d y +ePw+Lp +++++ee+ wyfF++ d kya++kr nr tk+g+Wk+tg+ ++
orange1.1g047949m 5 VGFRFYPTDEEII-CLLKMKRLDPGFSV-RTIKEIDFYGFEPWELPchSEIQSEEEVWYFFCEPDYKYAKSKRVNRGTKEGTWKKTGNGSKI 94
7************.88999999999999.88***************6448888999************************************ PP
NAM 93 lsk.kgelvglkktLvfykg.rapkgektdWvmheyrl 128
++k ++e++g+k++L f + +a+k kt+Wvmhe ++
orange1.1g047949m 95 KRKySTEVIGTKRILSFSRHdSASKKAKTEWVMHEIAV 132
*9988899**********764888999********875 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 389 aa
Download sequence Send
to blast |
MNSLVGFRFY PTDEEIICLL KMKRLDPGFS VRTIKEIDFY GFEPWELPCH SEIQSEEEVW 60
YFFCEPDYKY AKSKRVNRGT KEGTWKKTGN GSKIKRKYST EVIGTKRILS FSRHDSASKK 120
AKTEWVMHEI AVEDDPVYKK DFVVCRLERK RDQMKFGVVS AKRKQAKKLG VSTSDKDQPS 180
QNLTSKRKRD QKLGVSISDQ DQSSQNLTSK RNHLAEDTNR NHFTRKEDLV SNNNHVTENG 240
VLVSEVQARD HSISHSRNRV SENIVENSVE AEARQLLEFN PQGGGYTGLN DASFSALQSP 300
VYPEQESSCS NGSSYGSGLL NSQFDSEQVD GQFNSWRDFQ NKYSPDETGQ TTPDFFSSKS 360
DNGVYVEDGV VESGYLGHLD AQVALYHM*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 5e-21 | 6 | 151 | 20 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 5e-21 | 6 | 151 | 20 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 5e-21 | 6 | 151 | 20 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 5e-21 | 6 | 151 | 20 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 7e-21 | 6 | 151 | 23 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 7e-21 | 6 | 151 | 23 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 7e-21 | 6 | 151 | 23 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 7e-21 | 6 | 151 | 23 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 7e-21 | 6 | 151 | 23 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 7e-21 | 6 | 151 | 23 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 7e-21 | 6 | 151 | 23 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 7e-21 | 6 | 151 | 23 | 169 | NAC domain-containing protein 19 |
| 4dul_A | 5e-21 | 6 | 151 | 20 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 5e-21 | 6 | 151 | 20 | 166 | NAC domain-containing protein 19 |
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