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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
orange1.1g047639m |
| Common Name | CISIN_1g047639mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
NAC |
| Protein Properties |
Length: 261aa MW: 30683.1 Da PI: 6.2357 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| orange1.1g047639m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 87.9 | 1.9e-27 | 4 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
+p+GfrF+Ptdeel+ + L+ kv+g++++l+ i e ++y++eP++L+ ++ e+e y ++ r++ + + + +g Wkat + k+
orange1.1g047639m 4 VPKGFRFNPTDEELI-QILESKVSGQQMPLHFSfIVERNLYELEPQQLQ-SL--PENERYCYCMRENDS------REVSGRGWWKATSHVKK 85
589************.88*********8885445**************8.33..67899*****98853......347789*********** PP
NAM 92 vlsk..kgel.....vglkktLvfy....kg.rapkgektdWvmheyrl 128
++++ + +g k+ L+f+ +g +++++ kt+W+mhey+l
orange1.1g047639m 86 IYATnnN--GscadvIGYKRPLTFHkfknNGrNRSNAIKTNWIMHEYTL 132
***8551..245555**********6665342556778*********98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 261 aa
Download sequence Send
to blast |
MMMVPKGFRF NPTDEELIQI LESKVSGQQM PLHFSFIVER NLYELEPQQL QSLPENERYC 60
YCMRENDSRE VSGRGWWKAT SHVKKIYATN NNGSCADVIG YKRPLTFHKF KNNGRNRSNA 120
IKTNWIMHEY TLHSLSTDWT LCKIKYKGKP SVQEELEDIR NDYRLRVNND FEASSSSSIS 180
VTNMDMQQHL ADSVAEQQLQ RQQQQPQPLQ QLEQQQQYAS YDPFSTQTMS TGYDYFNDHD 240
HQLEQAHTSE QLFTTLWSWQ *
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 7e-17 | 2 | 154 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 7e-17 | 2 | 154 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 7e-17 | 2 | 154 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 7e-17 | 2 | 154 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 7e-17 | 2 | 154 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 7e-17 | 2 | 154 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 7e-17 | 2 | 154 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 7e-17 | 2 | 154 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 7e-17 | 2 | 154 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 7e-17 | 2 | 154 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 7e-17 | 2 | 154 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 7e-17 | 2 | 154 | 18 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 7e-17 | 2 | 154 | 15 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 7e-17 | 2 | 154 | 15 | 171 | NAC domain-containing protein 19 |
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