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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
orange1.1g045934m |
| Common Name | CISIN_1g045934mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
NAC |
| Protein Properties |
Length: 351aa MW: 39637.7 Da PI: 8.1871 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| orange1.1g045934m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 162.8 | 1.3e-50 | 14 | 140 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
ppGfrFhP+d+el+v+yL++kv++++l++ + i+evd+yk++Pw+Lpk++ +e+ew+fFs+rd+ky++g+r+nra+ sgyWkatg+dk++l
orange1.1g045934m 14 PPGFRFHPSDQELIVYYLQNKVTSRPLPA-SLIAEVDLYKYNPWELPKQALFGEDEWFFFSPRDRKYPNGERPNRAAGSGYWKATGTDKPIL 104
9****************************.89***************88778999************************************* PP
NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
s+ ++ + g+kk Lvfy+gr p+g ktdW+m+eyrl
orange1.1g045934m 105 SSvGSVNLGVKKALVFYTGRPPRGAKTDWMMNEYRL 140
9988889***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 351 aa
Download sequence Send
to blast |
MEREHNPAAS FQFPPGFRFH PSDQELIVYY LQNKVTSRPL PASLIAEVDL YKYNPWELPK 60
QALFGEDEWF FFSPRDRKYP NGERPNRAAG SGYWKATGTD KPILSSVGSV NLGVKKALVF 120
YTGRPPRGAK TDWMMNEYRL ADTRIKPSKS KGSMRLDDWV LCRVRHKSNM PKSAWEIHNT 180
QRAELVNDSP RTEMARPAYV NHNDDMIRDC LTKDCRLLAS ILAGQALPPI QTVSSLSCQG 240
SNNGNNSTPA YGECAPSGVN SPLTVSSKDT LFNPLKRKPS EENWCENLLP FNKKSICDNK 300
DLDFPLSKAL PNHGIDYYSQ CQEGIYNNPS DTLIDFPELN ELAFTSKYLQ *
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 4e-68 | 3 | 169 | 7 | 167 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 4e-68 | 3 | 169 | 7 | 167 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 4e-68 | 3 | 169 | 7 | 167 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 4e-68 | 3 | 169 | 7 | 167 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-68 | 3 | 169 | 10 | 170 | NAC domain-containing protein 19 |
| 3swm_B | 3e-68 | 3 | 169 | 10 | 170 | NAC domain-containing protein 19 |
| 3swm_C | 3e-68 | 3 | 169 | 10 | 170 | NAC domain-containing protein 19 |
| 3swm_D | 3e-68 | 3 | 169 | 10 | 170 | NAC domain-containing protein 19 |
| 3swp_A | 3e-68 | 3 | 169 | 10 | 170 | NAC domain-containing protein 19 |
| 3swp_B | 3e-68 | 3 | 169 | 10 | 170 | NAC domain-containing protein 19 |
| 3swp_C | 3e-68 | 3 | 169 | 10 | 170 | NAC domain-containing protein 19 |
| 3swp_D | 3e-68 | 3 | 169 | 10 | 170 | NAC domain-containing protein 19 |
| 4dul_A | 4e-68 | 3 | 169 | 7 | 167 | NAC domain-containing protein 19 |
| 4dul_B | 4e-68 | 3 | 169 | 7 | 167 | NAC domain-containing protein 19 |
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