PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID orange1.1g045919m
Common NameCISIN_1g045919mg
Organism
Citrus sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family G2-like
Protein Properties Length: 277aa    MW: 31793.9 Da    PI: 8.2279
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
orange1.1g045919mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like66.54.5e-21228277151
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                        kpr++Wt+eLH +F+eav++L G  kA Pk il+ m+v+gLt  +v+SHLQ
  orange1.1g045919m 228 KPRIVWTSELHLKFIEAVSSL-GDIKARPKLILQKMNVPGLTQRQVASHLQ 277
                        79*******************.8999************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011013.513166IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23002.8E-7884No hitNo description
SuperFamilySSF521721.25E-6965IPR011006CheY-like superfamily
PROSITE profilePS5129412.598225277IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.4E-20225277IPR009057Homeodomain-like
SuperFamilySSF466891.47E-12226277IPR009057Homeodomain-like
TIGRFAMsTIGR015579.3E-18228277IPR006447Myb domain, plants
PfamPF002491.5E-6232277IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MANVDISNID SLSFVRVLVK EEIPIILMSS RRNEIFSWRA LVEGACFFLE KPISFDDLKY  60
VWQHSYIYKR RSKIQLEDAR KPEQEILLNR GNISQGKRIN EGGDDVSRNI ANASATDDLR  120
YSINADQNEK NNKQMEVDAQ VHIFDENSVK ESQNACNMEQ HLVMANDQIQ EQGGLIKTKR  180
SLDDDRGGEK KRNLNSDNEN SNSFMVPTEE KGKEMNENNN GHVKKKRKPR IVWTSELHLK  240
FIEAVSSLGD IKARPKLILQ KMNVPGLTQR QVASHLQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1223228KKKRKP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015382697.10.0putative two-component response regulator-like APRR6
TrEMBLA0A067GNF80.0A0A067GNF8_CITSI; Uncharacterized protein (Fragment)
TrEMBLA0A2H5P5N20.0A0A2H5P5N2_CITUN; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2005156
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.61e-14ARR-B family protein