 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
orange1.1g041600m |
| Common Name | CISIN_1g041600mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
| Family |
Nin-like |
| Protein Properties |
Length: 161aa MW: 18578.5 Da PI: 8.8146 |
| Description |
Nin-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| orange1.1g041600m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | RWP-RK | 78.4 | 7.6e-25 | 68 | 118 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
+ +++l dl yF+lpi++AA+ +++c+Tv+K+iCR+ G++RWPhRkiks+
orange1.1g041600m 68 TGKLTLRDLMIYFHLPIEEAARRMKLCPTVVKKICRRDGLHRWPHRKIKSI 118
5689*********************************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 161 aa
Download sequence Send
to blast |
FCKKSIENVK EYLVQYCEER KQAGFMMLPD PLSDFYEAVC VGLVLDDNLT TDDYSQPPMT 60
NSVQRERTGK LTLRDLMIYF HLPIEEAARR MKLCPTVVKK ICRRDGLHRW PHRKIKSIQR 120
RMSVASGRLR SNDAEERANA QIEIQRLQEE MAAACAGLTR *
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KX064680 | 1e-159 | KX064680.1 Citrus trifoliata clone 3 RWP-RK domain containing protein (RKD5) mRNA, complete cds. |
