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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
orange1.1g041370m |
Common Name | CISIN_1g041370mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
bHLH |
Protein Properties |
Length: 311aa MW: 35152.8 Da PI: 5.3461 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g041370m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 17.3 | 8.6e-06 | 183 | 226 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
++ r RR+ri ++ +eL +l+P +++ ae+ + A +Y+k Lq
orange1.1g041370m 183 IAARERRRRITEKTQELGKLIPGgH------RMNTAEMFQAASKYVKFLQ 226
56799*****************955......9*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 311 aa
Download sequence Send
to blast |
MALSYCSNWE SLQQLTSDML SYSSNSSFHH HQQQPQQLQQ QAQVVLPQLL DETLFSFGNN 60 SGGCFEFSDT LIDPFLPPDE FFYGDSYTNL LPYFSSPSDA LISLSPEIFP PEDLESCQLP 120 KRQKSHHCDS NFAPNFFYGY VPNPPLMPEF LPEIPAPVTQ FQAPKPESSV KKPNGTSLSV 180 QSIAARERRR RITEKTQELG KLIPGGHRMN TAEMFQAASK YVKFLQAQVK VLQLIQPKQQ 240 EMKEPFHMHA QDLQNLLASP IIQEKLYSED KCLVPKEFVE TLANDPEIQS KPMVFQGIDQ 300 LLRTNIGGHS *
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