 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
orange1.1g039289m |
| Common Name | CISIN_1g039289mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
| Family |
FAR1 |
| Protein Properties |
Length: 243aa MW: 28062.8 Da PI: 8.9161 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| orange1.1g039289m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 73.1 | 6.2e-23 | 41 | 128 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
+fYn+YAke GFs+r+++sk k+++ i+++++vC keg+++++k +++r+r r gC akl+v k++ gk++v +++eHnH+l+
orange1.1g039289m 41 EFYNKYAKEGGFSIRINSSKICKESNDIIRKEYVCFKEGQARQSKVV--NRKRRRGIIRGGCSAKLVVVKSEFGKYMVRIFVEEHNHALS 128
6***************************************9998766..899999*********************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 243 aa
Download sequence Send
to blast |
MNAQNVVGQS NCEDSLYVPE VALDRKPHKG QEFDTLDDAY EFYNKYAKEG GFSIRINSSK 60
ICKESNDIIR KEYVCFKEGQ ARQSKVVNRK RRRGIIRGGC SAKLVVVKSE FGKYMVRIFV 120
EEHNHALSSP RRVHLLRSHR SMSVVQKNLS QQLAVVSIPT CQQIGLFELQ AGGLQNMGCV 180
QRDFYNNDRN LWNELKGHDA DMLYEHFQSE KEKNSSFFYS IKAGCDDRIT HCFWADVVCR 240
RAY
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AY336943 | 0.0 | AY336943.1 Poncirus trifoliata NBS-LRR-type disease resistance protein-like gene, complete sequence. |
