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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
orange1.1g038853m |
Common Name | CISIN_1g038853mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
EIL |
Protein Properties |
Length: 423aa MW: 47354.7 Da PI: 5.923 |
Description |
EIL family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g038853m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | EIN3 | 381 | 1.9e-116 | 1 | 291 | 49 | 353 |
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS- CS
EIN3 49 msraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselq 140
msraQD+iLkYM+k+mevc+ qGfvYgi+pe gk v+g+sdsLr+WWk++v+fd+n+p ai++y + l ++ +l ++ s+ h l+elq
orange1.1g038853m 1 MSRAQDSILKYMVKIMEVCKGQGFVYGIVPERGKAVTGSSDSLREWWKDNVRFDKNAPLAIAQY-MDPLSEQDTGDLIDNPGSQMHYLHELQ 91
9***************************************************************.44455555555566899********** PP
HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSS CS
EIN3 141 DTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqsk 232
DTtlgSLLsalmqhc ppqr+fple+g++pPWWPtG+e+wwge+g+sk++g+ppy+kphdl+kawkvsvL+avikhmsp++++ir+l+ qsk
orange1.1g038853m 92 DTTLGSLLSALMQHCVPPQRKFPLERGLAPPWWPTGSEAWWGEQGTSKEHGPPPYRKPHDLRKAWKVSVLAAVIKHMSPNLNKIRRLVKQSK 183
******************************************************************************************** PP
SSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
EIN3 233 ylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedve..gkkeskikhvqavkttagfpvvrkrkkkpsesakvss 322
+lq+km+ake+ ++++v+n+ee++++ l+k+ k+ ++++ke+ + k ++ +v +++t +v +krk e+++v++
orange1.1g038853m 184 CLQHKMTAKETQTWSKVVNKEESLLQ--------LTKKCLKISSNEDHKEEEApiVGKGKH-VNVPSCHT---SNVGEKRK-CVFEREIVND 262
**********************9873........444555555555555555555444444.34555555...89999998.7888888887 PP
X......XXXXXXX.XXXXXXXXXXXXXXXX CS
EIN3 323 kevsrtcqssqfrgsetelifadknsisqne 353
+ + c++s++++se ++f dkns+s++e
orange1.1g038853m 263 T--QYACENSKCPQSELGFGFVDKNSRSDHE 291
7..69***********************997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0080167 | Biological Process | response to karrikin |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 423 aa
Download sequence Send
to blast |
MSRAQDSILK YMVKIMEVCK GQGFVYGIVP ERGKAVTGSS DSLREWWKDN VRFDKNAPLA 60 IAQYMDPLSE QDTGDLIDNP GSQMHYLHEL QDTTLGSLLS ALMQHCVPPQ RKFPLERGLA 120 PPWWPTGSEA WWGEQGTSKE HGPPPYRKPH DLRKAWKVSV LAAVIKHMSP NLNKIRRLVK 180 QSKCLQHKMT AKETQTWSKV VNKEESLLQL TKKCLKISSN EDHKEEEAPI VGKGKHVNVP 240 SCHTSNVGEK RKCVFEREIV NDTQYACENS KCPQSELGFG FVDKNSRSDH ESHCTYTTDE 300 GESNDGNNEL GGQPGGSVDD ARITLTLADW INMELQKADR HLNEVAGGGS GSSAEDYESF 360 WDSGIDDLAM DGAFDSQRRH SLRPSLSSED HVAADQHCGA TSVWDLGYEN HKDYEDYEEH 420 KA*
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Functional Description ? help
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Source |
Description |
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |