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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
orange1.1g038778m |
| Common Name | CISIN_1g038778mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
NAC |
| Protein Properties |
Length: 127aa MW: 14806.1 Da PI: 10.4145 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| orange1.1g038778m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 97.3 | 2.2e-30 | 5 | 127 | 3 | 124 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
+GfrF+P++e++ + L+kk + +++ ++ik++ di+++ePwdL +k+++e++ +yfF+k ky++++r++r t++gyWk tg+ +
orange1.1g038778m 5 MGFRFQPSNEQIF-CLLEKKRLNPHFSH-HTIKDIdDICSLEPWDLAgaSKTESEDRVCYFFCKPYYKYKKSTRAHRRTNAGYWKVTGRGSK 94
7**********99.88999999999888.77***999*********8533777788899********************************* PP
NAM 92 vlskkgelvglkktLvf.ykgrapkgektdWvmh 124
+++ ++ l g+kk+L+f y+g a+k k Wvmh
orange1.1g038778m 95 IKT-RNGLSGTKKILTFkYHGPASKKAKIGWVMH 127
**9.8889*********559999999*******9 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 127 aa
Download sequence Send
to blast |
MESLMGFRFQ PSNEQIFCLL EKKRLNPHFS HHTIKDIDDI CSLEPWDLAG ASKTESEDRV 60
CYFFCKPYYK YKKSTRAHRR TNAGYWKVTG RGSKIKTRNG LSGTKKILTF KYHGPASKKA 120
KIGWVMH
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 3e-14 | 6 | 127 | 20 | 138 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 3e-14 | 6 | 127 | 20 | 138 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 3e-14 | 6 | 127 | 20 | 138 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 3e-14 | 6 | 127 | 20 | 138 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-14 | 6 | 127 | 23 | 141 | NAC domain-containing protein 19 |
| 3swm_B | 2e-14 | 6 | 127 | 23 | 141 | NAC domain-containing protein 19 |
| 3swm_C | 2e-14 | 6 | 127 | 23 | 141 | NAC domain-containing protein 19 |
| 3swm_D | 2e-14 | 6 | 127 | 23 | 141 | NAC domain-containing protein 19 |
| 3swp_A | 2e-14 | 6 | 127 | 23 | 141 | NAC domain-containing protein 19 |
| 3swp_B | 2e-14 | 6 | 127 | 23 | 141 | NAC domain-containing protein 19 |
| 3swp_C | 2e-14 | 6 | 127 | 23 | 141 | NAC domain-containing protein 19 |
| 3swp_D | 2e-14 | 6 | 127 | 23 | 141 | NAC domain-containing protein 19 |
| 4dul_A | 3e-14 | 6 | 127 | 20 | 138 | NAC domain-containing protein 19 |
| 4dul_B | 3e-14 | 6 | 127 | 20 | 138 | NAC domain-containing protein 19 |
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