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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
orange1.1g038571m |
| Common Name | CISIN_1g038571mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
Trihelix |
| Protein Properties |
Length: 322aa MW: 36809 Da PI: 7.505 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| orange1.1g038571m | genome | ICGC | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 67.7 | 2.3e-21 | 40 | 131 | 1 | 83 |
trihelix 1 rWtkqevlaLiearremeerlr.........rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83
rWt+qe+ +Li+++r +e+r+r r+ +p+W++v++++++ g++r p+qC+++w nl +++kik++e++ ++e++s +++ +
orange1.1g038571m 40 RWTRQETIVLIQGKRVVEDRIRgfrtstsafRSDHSEPKWDSVASYCKQYGVNRRPVQCRKRWGNLLVDFRKIKRWESQMKEEKQSFWVMRN 131
8*******************9966444333334599********************************************999998888765 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MEPGSNDKHE DGSSLPNGYN EEQAIDGNTD DRSKTARNPR WTRQETIVLI QGKRVVEDRI 60
RGFRTSTSAF RSDHSEPKWD SVASYCKQYG VNRRPVQCRK RWGNLLVDFR KIKRWESQMK 120
EEKQSFWVMR NESRKQMKLP GYFDREVYDV LDGVLAMPAV PLTTMSVSEE DEDDEVFDSD 180
RSTAAGDGLF SDSEPSQRQE ISHNPEKETT ERQSPSKKVA AQLHVADTLK EKLAGTTTAN 240
GSTTQERWKR RRLSSCVSKE TNMGDLLFKV LERNSSMLNT QLEAQNINCQ LDREQKKEHS 300
DNLIAAMNKL TDALLRIGNK L*
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