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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
orange1.1g037709m |
| Common Name | CISIN_1g037709mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
NAC |
| Protein Properties |
Length: 395aa MW: 44566.4 Da PI: 5.1961 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| orange1.1g037709m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 90.9 | 2.2e-28 | 5 | 135 | 3 | 127 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkya....tgkrknratksgyWkatgk 88
G+ F+P dee++ + Lkkk + +++ ++ike+d y+++PwdL +++++ e+ wyfFsk + + a +g++++r+tksg+Wk+tg+
orange1.1g037709m 5 TGIGFRPLDEEII-DLLKKKRLDPGFTV-QTIKEIDFYSFDPWDLAgfSEFQSMEDVWYFFSKPKYRGAkrkrSGQQQHRKTKSGTWKKTGS 94
699**********.99*******99999.88**************85448888889******976544423337999*************** PP
NAM 89 dkevlsk.kgelvglkktLvfykg.rapkgektdWvmheyr 127
e+++k ++e++g k+ Lvf + +++ +t+W+mhe +
orange1.1g037709m 95 GSEMKRKnSTEVIGNKDYLVFIHDdATSEKANTKWLMHEIA 135
999999856778*********96625566679*******76 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 395 aa
Download sequence Send
to blast |
MDSLTGIGFR PLDEEIIDLL KKKRLDPGFT VQTIKEIDFY SFDPWDLAGF SEFQSMEDVW 60
YFFSKPKYRG AKRKRSGQQQ HRKTKSGTWK KTGSGSEMKR KNSTEVIGNK DYLVFIHDDA 120
TSEKANTKWL MHEIAIADDP LYKENFVVCR LEGKNCDKKL GVSTTDKHQS SQDFASSSSI 180
NVVEDISLES AQPPDRHLVS KTNQVVENIF LKNQLPPSEN LFSCNEDSAT TSLDSGLSPQ 240
NTSTGLQLVP HRVLESRRPP DEQRATYSID VVENSFKVEP RIPAEFNTHG SFNRLNNDCF 300
LALQSPTYLE QESSYSNGPS FGGDLLNSQF DSGQAIAFSE SQQLPNHLIS CSRNHVAENT 360
STGLQLVLHP VLESWRSPDE QRATYSIDVV ENSFE
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 7e-13 | 6 | 154 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 7e-13 | 6 | 154 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 7e-13 | 6 | 154 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 7e-13 | 6 | 154 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
| 3ulx_A | 7e-13 | 6 | 154 | 18 | 168 | Stress-induced transcription factor NAC1 |
| 4dul_A | 7e-13 | 6 | 154 | 20 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 7e-13 | 6 | 154 | 20 | 165 | NAC domain-containing protein 19 |
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