![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | orange1.1g037696m | ||||||||
Common Name | CISIN_1g037696mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 364aa MW: 40909.8 Da PI: 7.0111 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.8 | 3.6e-11 | 228 | 273 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ orange1.1g037696m 228 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 273 8999*********************************999987765 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.1E-13 | 224 | 288 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.703 | 226 | 278 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.14E-12 | 228 | 282 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 6.0E-14 | 228 | 279 | No hit | No description |
Pfam | PF00170 | 9.7E-10 | 228 | 272 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 6.88E-24 | 229 | 279 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 231 | 246 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 364 aa Download sequence Send to blast |
MAQLPPKIPN MSHNWSSFPY QRMSFISSNN NNNNDNNNNN IANAATTMTL NNNNNIHHNQ 60 PHWVDEFLDF SSVRRGAHRR SISDSVAFLD PPSSLVVVEE CRNSNNSNNN NNNSTMNNIM 120 SSSDANYCFD RLDDEQLMSM FSDDISVSVP PTASSSNPST PSDQNSNNDE KVTAPSDQQQ 180 QQKQQQQQPK NEPGEVESSC KNNEPSSSQT TTHQTPPASN GDTIIDPKRV KRILANRQSA 240 QRSRVRKLQY ISELERSVTT LQTEVSALSP RVAFLDHQRL ILNVDNSALK QRIAALAQDK 300 IFKDAHQEAL KKEIERLRQV YHQQNIKKMK NNNNSNNNAT PPPQQPPSQP MNTDTIVCMD 360 KDQ* |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_006451750.1 | 0.0 | basic leucine zipper 61 isoform X2 | ||||
Refseq | XP_006494850.1 | 0.0 | basic leucine zipper 61-like isoform X2 | ||||
Swissprot | Q9M2K4 | 1e-105 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | A0A067EX71 | 0.0 | A0A067EX71_CITSI; Uncharacterized protein | ||||
STRING | XP_006494850.1 | 0.0 | (Citrus sinensis) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1753 | 27 | 77 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G58120.1 | 1e-83 | bZIP family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | orange1.1g037696m |
Publications ? help Back to Top | |||
---|---|---|---|
|