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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
orange1.1g036664m |
Common Name | CISIN_1g036664mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
LBD |
Protein Properties |
Length: 226aa MW: 25831.7 Da PI: 7.2079 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g036664m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 117.5 | 8.3e-37 | 24 | 123 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92
aCa+Ck++rrkC+k+C la+yfpa+qpk+f+nvh+l+G+s vlk+l++++++++++ams++++e+++ra+ Pv+G++g+ ++l++ql+ + +
orange1.1g036664m 24 ACAVCKYQRRKCEKNCKLAKYFPANQPKTFQNVHRLYGVSSVLKILDSVEDDKKDIAMSTVIFESNMRAEYPVHGCFGLTFRLHHQLQASME 115
7******************************************************************************************* PP
DUF260 93 elallkee 100
el l++++
orange1.1g036664m 116 ELRLVNAQ 123
***99987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 226 aa
Download sequence Send
to blast |
KLFFILCLVP SLIKMTIKGG TKQACAVCKY QRRKCEKNCK LAKYFPANQP KTFQNVHRLY 60 GVSSVLKILD SVEDDKKDIA MSTVIFESNM RAEYPVHGCF GLTFRLHHQL QASMEELRLV 120 NAQLAGNEFC VETDDDVKPF IKIEQNPNYY TDMFNNMPLG IQSPSSSHGI PIPLQELECI 180 NSIHDDRVMA FDHTIPDHDR NPYLEPKAKE VSDASRYIID CHIRY*
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