PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | orange1.1g035544m | ||||||||
Common Name | CISIN_1g035544mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bZIP | ||||||||
Protein Properties | Length: 728aa MW: 78247.7 Da PI: 7.0988 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.2 | 2e-14 | 219 | 281 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+e kr r+++NRe+A+ sRqRKk ++eeLe+kv ++ + +L ++++ e a+lk+++ orange1.1g035544m 219 EEEMKRKARLMRNRESAQLSRQRKKHYVEELEDKVRNMHSTIADLNSKISFFMAENASLKQQL 281 789*********************************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00170 | 6.2E-13 | 219 | 281 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 1.3E-16 | 219 | 283 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.174 | 221 | 281 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.97E-12 | 222 | 281 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.3E-18 | 223 | 282 | No hit | No description |
CDD | cd14704 | 6.11E-22 | 224 | 275 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042538 | Biological Process | hyperosmotic salinity response | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005783 | Cellular Component | endoplasmic reticulum | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 728 aa Download sequence Send to blast |
MSDPLLAEAP PPSNDFDALS IPPLDPPYLN SQIPHPCASS DDLDFVLDDN CDFDFTIDDL 60 YFASEDDTFF LPSEDPQDGE FGGFSPGVDG GAAAASPGSG SSGILGNPAS LDVESYLNYS 120 SSPQNSGNRI SHLNSIGISG GRSENSGSGV SSDNTDAPSP DSGNLVVDQK IKMEEVSKKG 180 IFKRKKDIEE TNNESRNNKY RKSSSLSVNE ADNDHNLGEE EMKRKARLMR NRESAQLSRQ 240 RKKHYVEELE DKVRNMHSTI ADLNSKISFF MAENASLKQQ LSGSNAMPPP LGMYPPPPHM 300 AAAPMPYGWM PCAAPYMVKP QGSQVPLVPI PRLKPQAAAA AVPSRTKKSD GNKSKSDGSK 360 TKKVASVSFL GLLFFILLFG GLVPLVDVKY GGIRDGVSGG YFSSGFYNQH RGRVLTINGY 420 SNGSGESMGI GFPNGRVGFD NRIHCARAVE SKEKESQPAP DSDEFVRPRN ASEPLVASLY 480 VPRNDKLVKI DGNLIIHSVL ASEKAMASHD ASKANSKEAT GLAIPKDFSP ALAIPDVRGN 540 GARHSHFYRN PAERQRAISS GSTDALKDHM KSSAANGKLQ QWFQEGLSGP LLSSGMCTEV 600 FQFDASPAPG AIIPASSVAN MTAEHRQNAT QVNRGRNRRI LHRLPVPLTN ITGERKVQKE 660 SFAGNKSASS MVVSVLVDPR ETGDGDVEGM ISPKSLSRIF VVVLLDSVKY VTYSCGLPRS 720 GLHLVTS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 625 | 638 | RQNATQVNRGRNRR |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Csi.1586 | 0.0 | fruit |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in salt and osmotic stress responses. Functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Functions as a stress sensor and transducer in ER stress signaling pathway. ER stress induces proteolysis of BZIP17 by SBT6.1 (S1P) and S2P, and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as protein involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269|PubMed:17662035, ECO:0000269|PubMed:20876872}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AM467835 | 4e-32 | AM467835.2 Vitis vinifera contig VV78X026338.5, whole genome shotgun sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006430509.1 | 0.0 | bZIP transcription factor 17 | ||||
Swissprot | O22208 | 0.0 | BZP17_ARATH; bZIP transcription factor 17 | ||||
TrEMBL | A0A067EF10 | 0.0 | A0A067EF10_CITSI; Uncharacterized protein | ||||
STRING | XP_006430509.1 | 0.0 | (Citrus clementina) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM8881 | 27 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40950.1 | 1e-173 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | orange1.1g035544m |