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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
orange1.1g031402m |
Common Name | CISIN_1g031402mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
ERF |
Protein Properties |
Length: 161aa MW: 17525.2 Da PI: 9.3617 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g031402m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57.3 | 3.8e-18 | 23 | 74 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+y+G+r++ +g+++AeIrdp+ ng +r +lg+f taeeAa+a+++a+ +++g+
orange1.1g031402m 23 RYRGIRRRA-WGKFAAEIRDPTRNG--TRLWLGTFSTAEEAARAYDRAAFAFRGH 74
69****777.**********98887..*************************997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 161 aa
Download sequence Send
to blast |
MKASQGGGKN NEKQRSVSVS EVRYRGIRRR AWGKFAAEIR DPTRNGTRLW LGTFSTAEEA 60 ARAYDRAAFA FRGHSAILNF PNEGQYRSQS SSGSSSLPYL VSPSPTSFSD AAGGNGSAGR 120 GVLSSSSGKE AEVIEFEYFD NNLLEELLEA RDNQYWPGKE *
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |