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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
orange1.1g030785m |
Common Name | CISIN_1g030002mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
ERF |
Protein Properties |
Length: 172aa MW: 19276.8 Da PI: 4.9301 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g030785m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 52.1 | 1.7e-16 | 83 | 131 | 4 | 55 |
AP2 4 kGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
GVr+++ +g+++AeIrdp k r++lg+f++ +Aaka++ a+ +++g
orange1.1g030785m 83 EGVRRRP-WGKYAAEIRDP---ArKGSRVWLGTFDSDVDAAKAYDSAAFRMRG 131
5******.**********8...4445**********99*************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009409 | Biological Process | response to cold |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009723 | Biological Process | response to ethylene |
GO:0009737 | Biological Process | response to abscisic acid |
GO:1902074 | Biological Process | response to salt |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 172 aa
Download sequence Send
to blast |
MSNMTTLEEE SSILEFIRQF LLGDFTSLDD PNLSFLQPME SEFPVIKSEP DSPTFCEIIK 60 PEPLDITCLG SSNWTESPQK SSEGVRRRPW GKYAAEIRDP ARKGSRVWLG TFDSDVDAAK 120 AYDSAAFRMR GRKAILNFPL EAGADSPPAK NSRKRRREKT LDLQESTISI I*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 152 | 156 | RKRRR |
2 | 152 | 158 | RKRRREK |
Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AM906074 | 5e-65 | AM906074.1 Citrus medica mRNA for ethylene-responsive element binding protein (erebp gene). |