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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
orange1.1g030575m |
| Common Name | CISIN_1g030575mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
| Family |
FAR1 |
| Protein Properties |
Length: 176aa MW: 20200.2 Da PI: 10.1259 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| orange1.1g030575m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 91.3 | 1.3e-28 | 11 | 100 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
kfY YA+++GF vr+ + ++s+++g++ r++ C+k+g++ ++k ++ e+++r++ r gCka++ vk+ek+gkw+vt++ ++HnH+l+
orange1.1g030575m 11 KFYMGYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPLV 100
6**********************************************9****************************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 176 aa
Download sequence Send
to blast |
MEFDSEDAAR KFYMGYARRM GFVVRIMQRR RSRTDGTTLA RRLGCNKQGF SPNSKGTNGP 60
EKKPRPSARE GCKATILVKM EKSGKWVVTR FIKDHNHPLV VTANGYSTVG DKDKKIEELT 120
LELERQEQLC AAYREKLFNF MNNVEEQTEE LSSKIQVIVD NIRKVESEML KSFLQ*
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques. {ECO:0000269|PubMed:15591448}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Putative transcription activator involved in regulating light control of development. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |
