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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
orange1.1g030306m |
Common Name | CISIN_1g030306mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
NAC |
Protein Properties |
Length: 180aa MW: 20889.5 Da PI: 4.7185 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g030306m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 48.6 | 2.6e-15 | 6 | 145 | 7 | 128 |
NAM 7 FhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL.pk..................kvka..eekewyfFskrdkkyatgkrknra 77
++P d+ l+ + L++k+ ++++e+ + + +++i++++P d+ p +ek +y ++++ y ++r
orange1.1g030306m 6 YNPFDQSLI-KQLNNKIIDEPVEFPD-LITTEINDHHPADFfPGsllrafctsfnnvqlpkgG--DrdREKGCYVLTPKHLLYGLTWLPERR 93
68*******.66*********99966.55669********95436889999988877665432..13356688***********99999999 PP
NAM 78 tksgyWkatgk.dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+k+gyWk g d +++ + g+lv +k++++f++ ++ g+ktdW m eyrl
orange1.1g030306m 94 AKNGYWKPYGYiDGRIFGACGKLVAIKQSFTFHEPGENIGRKTDWNMTEYRL 145
9********98799************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 180 aa
Download sequence Send
to blast |
METDPYNPFD QSLIKQLNNK IIDEPVEFPD LITTEINDHH PADFFPGSLL RAFCTSFNNV 60 QLPKGGDRDR EKGCYVLTPK HLLYGLTWLP ERRAKNGYWK PYGYIDGRIF GACGKLVAIK 120 QSFTFHEPGE NIGRKTDWNM TEYRLLKHSC TSLDSWVLCK IYWESEIIEN EDFSDEEEE*
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