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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
orange1.1g029970m |
| Common Name | CISIN_1g029970mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
LBD |
| Protein Properties |
Length: 185aa MW: 19774.6 Da PI: 4.9665 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| orange1.1g029970m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 65.7 | 1.1e-20 | 12 | 85 | 23 | 96 |
DUF260 23 paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96
p++q++++ +v+k+FG++ ++++++a+pe++r+ +++sl+yeA r+ +Pv+Gavg++++++++++q+++e +l
orange1.1g029970m 12 PQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVNPVSGAVGLLWTGNWNVCQSAVERVL 85
8999*****************************************************************99876 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 185 aa
Download sequence Send
to blast |
MLRQSIQWIG TPQAQANATV FVAKFFGRAG LMSFISAVPE TQRPSLFQSL LYEAVGRTVN 60
PVSGAVGLLW TGNWNVCQSA VERVLCGGAL QPLPCPLAPE LDDVSESAVN CTNNSPKDVI 120
TPPPKRKAVS DFQDDLHLGL KPCLPEKLRA ETPSEESETT TSGTGSDNCC SEVAGEKKLL 180
RLFL*
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in young shoots, roots, stems, leaves and flowers. {ECO:0000269|PubMed:12068116}. |
