PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | orange1.1g029952m | ||||||||
Common Name | CISIN_1g029952mg, LOC102619043 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bZIP | ||||||||
Protein Properties | Length: 186aa MW: 21579.2 Da PI: 10.5329 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.9 | 1.4e-10 | 78 | 135 | 5 | 62 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++ rr+++NRe+ArrsR RK++ +e+L++ L eN++L ++l ++++++++ orange1.1g029952m 78 RKRRRMISNRESARRSRMRKQKHLENLRNQLNRLRMENRELSNRLRFALHHCQRVRTD 135 5789**************************************9998777777776665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.0E-9 | 70 | 125 | No hit | No description |
SMART | SM00338 | 4.9E-12 | 74 | 138 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.622 | 76 | 122 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.97E-10 | 78 | 128 | No hit | No description |
Pfam | PF00170 | 7.3E-8 | 78 | 134 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.60E-18 | 79 | 130 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 81 | 96 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence Send to blast |
MLSACPAIFS SEMMFGNPFP DFESEFTPWD LPDPFPAPNQ SPIPAVSSSS SDEPNQIQTN 60 SNSGSDEPNQ TVSVIDERKR RRMISNRESA RRSRMRKQKH LENLRNQLNR LRMENRELSN 120 RLRFALHHCQ RVRTDNDRLR SEHTILRRRL SEIRQILLYR QLQQVTSAWP CNSAVTNEQT 180 SSLIT* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 77 | 81 | RKRRR |
2 | 77 | 98 | RKRRRMISNRESARRSRMRKQK |
3 | 90 | 97 | RRSRMRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006466428.1 | 1e-132 | basic leucine zipper 4 | ||||
TrEMBL | A0A067GJM5 | 1e-131 | A0A067GJM5_CITSI; Uncharacterized protein | ||||
STRING | XP_006466428.1 | 1e-132 | (Citrus sinensis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3338 | 26 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49760.1 | 2e-22 | basic leucine-zipper 5 |
Link Out ? help Back to Top | |
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Phytozome | orange1.1g029952m |
Entrez Gene | 102619043 |