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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
orange1.1g027874m |
| Common Name | CISIN_1g027074mg |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
NAC |
| Protein Properties |
Length: 218aa MW: 25074.2 Da PI: 5.8843 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| orange1.1g027874m | genome | ICGC | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 59.5 | 1.1e-18 | 12 | 117 | 5 | 128 |
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96
+ F tde+l L++ ++g++l++ +vi++v+ y++ P++Lp + wy +++++++ +++g W+a+g++ e++s +
orange1.1g027874m 12 VDFASTDENLFG-SLERMIRGSPLPC-NVINDVNPYNHRPSNLP------DGVWYLVCSKENTS---------AQHGQWRAKGETCEIFS-N 85
67999*****95.5************.99**************9......45799999987654.........5689*************.9 PP
NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128
+ +g ++tL f++g+ p+ +ktdWvm+e+r+
orange1.1g027874m 86 SYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI 117
99****************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 218 aa
Download sequence Send
to blast |
MCPPTASTPI DVDFASTDEN LFGSLERMIR GSPLPCNVIN DVNPYNHRPS NLPDGVWYLV 60
CSKENTSAQH GQWRAKGETC EIFSNSYIIG WRTTLEFFEG QVPNERKTDW VMQEFRITQK 120
RLYGDKKEED SSSLCRVFLS GKQSPNHEMQ QKLFSANINN ETHSHSTELS FDKDKDDTRQ 180
VSIIRHEVCQ PQHSGLVFCL LEWISCLNFV WFSLIFK*
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