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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
orange1.1g025998m |
Common Name | CISIN_1g025998mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
Dof |
Protein Properties |
Length: 246aa MW: 27535.3 Da PI: 4.6557 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g025998m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 119.9 | 9.3e-38 | 11 | 69 | 4 | 62 |
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+a +cprC s ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn +++
orange1.1g025998m 11 TAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAK 69
5678**************************************************98765 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 246 aa
Download sequence Send
to blast |
MEKKWKPDVE TAPSCPRCAS PNTKFCYYNN YSLSQPRYFC KGCRRYWTKG GSLRNVPVGG 60 GCRKNGRAKS SRRKSPFNND RPKASCSSDH TDDAVSTPNG GSDIDLAVVF ANSSTPDNVV 120 QNDDFNVHNV MGNGDLNILG EFPQVFGQLQ EEEDRRVQDF LEDDMVNAHG LQALLGDEIV 180 DHQVALWSDQ AETETLPNFT WQRAMFQLQD FDSFPADDQL KASANLISDN WTSFDLPGFE 240 LYSRP*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}. |