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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
orange1.1g024547m |
Common Name | CISIN_1g024547mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
TCP |
Protein Properties |
Length: 267aa MW: 27597.8 Da PI: 10.3894 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g024547m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 122.8 | 3.7e-38 | 31 | 127 | 2 | 97 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg..... 88
++kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ ++s s+ ++ +s +
orange1.1g024547m 31 TVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFS-TVSVSVRGGGNSTSlsstv 121
689*************************************************************99999777.3333333332222233222 PP
TCP 89 .kaaksaaks 97
+ +a s
orange1.1g024547m 122 sS----SAIS 127
21....2222 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 267 aa
Download sequence Send
to blast |
MSNSDGATNG VSNGAIIDPQ RQQPPGNGAL TVKKPPSKDR HSKVDGRGRR IRMPIICAAR 60 VFQLTRELGH KSDGQTIEWL LRQAEPSIIA ATGTGTTPAS FSTVSVSVRG GGNSTSLSST 120 VSSSAISAAL EHKPSLGPAP FILGKRVRSD DDGTKGEDSI SAVGPATVGP IVGPATPGGG 180 FWALPARPDF GQVWSFAAAA APEMVVQAAS QQQHHHHQQP HQLFMQQAMG EASAARVGNY 240 LPGHLNLLAS LSGGPGSSGR REEDPR*
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