|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
orange1.1g023047m |
Common Name | CISIN_1g023047mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
Family |
Dof |
Protein Properties |
Length: 289aa MW: 31781.4 Da PI: 8.3654 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g023047m | genome | ICGC | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 126.4 | 8.8e-40 | 40 | 101 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
ke+al+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrn+PvGgg+rknk+sss
orange1.1g023047m 40 KEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSS 101
7899******************************************************9875 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MDTAQWPQEI VVKPIEEIVT NTCPKPASAA ALERKARPQK EQALNCPRCN STNTKFCYYN 60 NYSLTQPRYF CKTCRRYWTE GGSLRNIPVG GGSRKNKRSS SSSKKLPDPA TPPSHHPHQN 120 PKIHDHGEDL NLSFPAATTQ GYRSFSELVQ LPNIDNKSQI PISSSTTTTT TTTSSQQLSA 180 LELLTGISSR GLNSFMPMPV PDPNAIYAPG FPMQDFKPTL NFSLDGLGSG YGSLHHQSVQ 240 ENNGRLLFPF EDLKQVSSTS DHMEQNREHG DSSGYWTGML GGGSWWGA*
|
Expression --
Description ? help
Back to Top |
Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Expressed at preprocambial stages first in wide domains, and later confined to sites of vein development. {ECO:0000269|PubMed:20563990}. |
Uniprot | TISSUE SPECIFICITY: Accumulates in the stele. {ECO:0000269|PubMed:20563990}. |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}. |