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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
orange1.1g021641m |
Common Name | CISIN_1g021641mg, LOC102631213 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
Dof |
Protein Properties |
Length: 310aa MW: 33749.2 Da PI: 8.7798 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g021641m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 125.4 | 1.8e-39 | 44 | 103 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
++++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+s
orange1.1g021641m 44 PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRS 103
6899******************************************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009639 | Biological Process | response to red or far red light |
GO:0009845 | Biological Process | seed germination |
GO:0005634 | Cellular Component | nucleus |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 310 aa
Download sequence Send
to blast |
MDAAKWPQNF PEVGGVKAME EVVSNTCNSS SSSRPPMLER KARPQEQLNC PRCNSTNTKF 60 CYYNNYSLTQ PRYFCKTCRR YWTEGGSLRN VPVGGGSRKN KRSISSSAAA ASSSNNNNNN 120 NNNYNKLIIP DLNPPSLSHF SSHENPKILK GGQDLNLGFQ VMHNNANDMS QYADHPAVAS 180 KAETNTTSND NINNNMSPVS ALDLLRTGIA SRAGLDHFIP TPMPDSNTLF SSGFPLQDIK 240 PAATLSFSID QANRFGIQDN IGNGSRLFFP FGELKQLSSA STTEVDHHSN KGTSTSTGYW 300 NGMFGGGSW*
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