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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
orange1.1g021353m |
Common Name | CISIN_1g0213532mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
NAC |
Protein Properties |
Length: 314aa MW: 34959.9 Da PI: 5.0155 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g021353m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 80.6 | 3.2e-25 | 13 | 113 | 36 | 128 |
NAM 36 evdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkge 117
+ +i++++P++Lp +k++ ++++fF+++ ++yatg+rk+r+ ++ +W++tgk+k+v++ +g ++g++k++v+y +++ k+
orange1.1g021353m 13 DQGICYTHPENLP-GAKKDGSSVHFFHRTTNAYATGQRKRRKiqsehslnEEHVRWHKTGKTKPVIE-NGIQKGCRKIMVLYksTKKGTKPD 102
347**********.55677899*******************85677666655899************.99************4434666778 PP
NAM 118 ktdWvmheyrl 128
k++Wvmh+y+l
orange1.1g021353m 103 KSNWVMHQYHL 113
*********98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MFIDEFIPTI EGDQGICYTH PENLPGAKKD GSSVHFFHRT TNAYATGQRK RRKIQSEHSL 60 NEEHVRWHKT GKTKPVIENG IQKGCRKIMV LYKSTKKGTK PDKSNWVMHQ YHLGTDEDEK 120 DDEYVVSKVF YQQTKQPEKN VDSPIIEVPD NLIPDSSPRT PLTNPPNPPR PGKSMVCDDV 180 ADDNTLKSSA QEPLHVAEAS HVPQPAVKLE DDQGYITCLA GESEPQDIGD PGLDGIYDSL 240 LLCKEDISSK VFSGVNNVSY ADIFHNAHHM KGNDSAPCGI ADLENLEFDT PPDSHLADLQ 300 FSDESILGWL DRI*
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