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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
orange1.1g020801m |
| Common Name | CISIN_1g020801mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
ERF |
| Protein Properties |
Length: 322aa MW: 35424.3 Da PI: 7.1642 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| orange1.1g020801m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 65.2 | 1.4e-20 | 135 | 184 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr ++ +g+W+AeIrd + + +r++lg+f+tae+Aa+a+++a+++++g
orange1.1g020801m 135 RYRGVRHRP-WGKWAAEIRDpF-----KaARVWLGTFDTAEDAARAYDEAALRFRG 184
7*****888.**********66.....56*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MRWKEWEMSA MVSALKHVVA GDTDVVVSQA QQMQQNDYNM KVTAVTSSVG NSSSSSSWAG 60
SGQKRAREME GGDNFSSRPE REVDELSHVT AGSVFVVTAG TERLSISAST RMQGEAIYEY 120
NSNKKSVRVQ EPGRRYRGVR HRPWGKWAAE IRDPFKAARV WLGTFDTAED AARAYDEAAL 180
RFRGNKAKLN FPENVKLAKS SPNANSVAAQ LTISDSTTTL LPISTPSEPI VHCQALDHYV 240
PNTEVSSDFR DYSFLVSDFA EFQRQPMSSY LSSASSPLRL TSSHPFPGQP PVQFMPAKTE 300
SDSAEFSIPP WNASSYYPPS G*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Ubiquitous with lower levels in seeds and siliques. {ECO:0000269|PubMed:16227468}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Negative regulator of the abscisic acid (ABA) signaling pathway involved in seed germination and in responses to stress conditions. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:16227468}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA) and stresses, including cold, drought and salt (PubMed:16227468, PubMed:26961720). Triggered by YY1 (PubMed:26961720). {ECO:0000269|PubMed:16227468, ECO:0000269|PubMed:26961720}. |
| Publications
? help Back to Top |
- Choi DS,Hwang BK
Proteomics and functional analyses of pepper abscisic acid-responsive 1 (ABR1), which is involved in cell death and defense signaling.
Plant Cell, 2011. 23(2): p. 823-42
[PMID:21335377] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Li T,Wu XY,Li H,Song JH,Liu JY
A Dual-Function Transcription Factor, AtYY1, Is a Novel Negative Regulator of the Arabidopsis ABA Response Network.
Mol Plant, 2016. 9(5): p. 650-661
[PMID:26961720] - Sanyal SK, et al.
Arabidopsis CBL interacting protein kinase 3 interacts with ABR1, an APETALA2 domain transcription factor, to regulate ABA responses.
Plant Sci., 2017. 254: p. 48-59
[PMID:27964784] - Choi SW,Lee SB,Na YJ,Jeung SG,Kim SY
Arabidopsis MAP3K16 and Other Salt-Inducible MAP3Ks Regulate ABA Response Redundantly.
Mol. Cells, 2017. 40(3): p. 230-242
[PMID:28292003]
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