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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
orange1.1g020318m |
| Common Name | CISIN_1g020318mg, LOC102622318 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
| Family |
BES1 |
| Protein Properties |
Length: 328aa MW: 35292.2 Da PI: 7.9118 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| orange1.1g020318m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 211.4 | 2.4e-65 | 2 | 147 | 1 | 150 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspes 92
++++r+ptwkEr+nnkrRERrRRaiaakiyaGLR++Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e ++++g sasas +s
orange1.1g020318m 2 TSGTRMPTWKERDNNKRRERRRRAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMDVMGGSASASACS 93
5899**************************************************************************************** PP
DUF822 93 slqsslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvsssl 150
s+q +sp++sy++sp sssfpsp s+ +++a+ +sl+p+l++ls++sss+
orange1.1g020318m 94 SYQ--------QSPCASYNPSPGSSSFPSPRSSHYTPHANGsadaNSLIPWLKNLSSSSSSA 147
***........*********************9999988768888**********9987765 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MTSGTRMPTW KERDNNKRRE RRRRAIAAKI YAGLRMYGNY RLPKHCDNNE VLKALCNEAG 60
WTVEEDGTTY RKGCKPVEYM DVMGGSASAS ACSSYQQSPC ASYNPSPGSS SFPSPRSSHY 120
TPHANGSADA NSLIPWLKNL SSSSSSASSK DPHHMYIHGG SISAPVTPPL SSPTCRTPRT 180
KNDWDEPTAV AAWAGQHYPF LPSSTPPSPG RQVLPDSGWL SGIQIPQSGP SSPTFSLVSR 240
NPFGFREEVL SGGPSRMWTP GQSGTCSPAV PAGVDNTSDV PMSDCIATEF AFGCNATGLV 300
KPWEGERIHE ECVSDDLELT LGNSKTR*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 4e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 4e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 4e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 4e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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