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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
orange1.1g018923m |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
ERF |
Protein Properties |
Length: 350aa MW: 39161.9 Da PI: 6.4375 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g018923m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 51.3 | 2.9e-16 | 116 | 167 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g
orange1.1g018923m 116 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 167
89****99**********99966...3.6*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 350 aa
Download sequence Send
to blast |
MAKLSQQSQK SNANNNNGVT KVKRTRRSVP RDSPPQRSSI YRGVTRQSIS VSAYDDEEAA 60 AHAYDLAALK YWGPDTILNF PLSTYQKELK DMEGLSREEY IGSLRRKSSG FSRGVSKYRG 120 VARHHHNGRW EARIGRVFGN KYLYLGTYAT QEEAATAYDM AAIEYRGLNA VTNFDLSRYI 180 KWLKPNHQIN PHLIDTTSPS SSSIINNGNN SDYNHQESNS SFFNNNNQSG STVRDQPPTT 240 TLFTDHYHQP AVRPVSATSA LGLLLQSSKF KEMMEMTSSS EADNHHCSSL TPSTESSDPL 300 QCSFPEDIQT YFGGCQDSSN FGEGDDDDDV FFRELNSFVP PMFQCDFDA*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |