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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
orange1.1g017919m |
Common Name | CISIN_1g017919mg, LOC102611003 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
Dof |
Protein Properties |
Length: 365aa MW: 38351.3 Da PI: 9.0569 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g017919m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 123.9 | 5.2e-39 | 75 | 134 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+
orange1.1g017919m 75 EAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 134
7789*****************************************************975 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 365 aa
Download sequence Send
to blast |
MVFSSIPAYL DPANWQQQPN PQTGASTGVS TQFVQPQAPP PPPPQPHGSG GGGAGSIRPG 60 SMADRARMAN VPMPEAALKC PRCESTNTKF CYFNNYSLSQ PRHFCKTCRR YWTRGGALRN 120 VPVGGGCRRN KRSKGGSSGS SKSPVNSTDR QTASGNNSTS TMSCNNSGGA SDILGLGPQI 180 PQLRFMTPNL HHFTSEFPSG DIGLNYGSLT APPVANELNF GGSLLSSLSG LDQWRLQQQA 240 HHHQQFPFLG GLDSSSSSPS GLYPFEGGVE ASGYGVGGSA GQIRPKISST GIVSQLAAAA 300 APVKMEESSH HHHQQQQEIN LSRQFLGMQG NEHQYWSSTT AAGAAAAGWT DLSSFSSSST 360 SNPL*
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