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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
orange1.1g015775m |
Common Name | CISIN_1g015775mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
ERF |
Protein Properties |
Length: 401aa MW: 44735 Da PI: 8.4696 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g015775m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.4 | 4.7e-20 | 222 | 271 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
++GVr+++ +g+WvAeIr p++ r+r++lg+f+taeeAa a++ a+ l+ge
orange1.1g015775m 222 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAMAYDTAAYMLRGE 271
8******9.**********955...5*************************997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 401 aa
Download sequence Send
to blast |
MENFMHKENY PSYFHGLATG SKFLGDQVTW GALSNASCQD DSSVESSSSA EEACGANLIN 60 KIPGFVKRDV VKEKNSSIPF VSGFDSVPVN FLESFPKLNR QAAANQVSDQ PPSSPSSLSN 120 FPNLTLFFQG SPMLNPSAAA DDDSLGNKDT SFTQLPQSSN EWLKMNQSLA NYSSKGFGDY 180 WLSTIKTQPM KYTGRKLQSQ HHHHQKCNSL EATAMASPGK LFRGVRQRHW GKWVAEIRLP 240 RNRTRVWLGT FDTAEEAAMA YDTAAYMLRG EYAHLNFPER KHQLKANSLN GNTATLLEAK 300 LQALSHQKPN NDHQQQQQKQ APTTKKNNIS HHENTSNTNK KLKGILESKV VIGSHHQELV 360 MENKKTHHHQ EVLDVDAVQL SRMPSLDMDT IWDSLLVPDS *
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