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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
orange1.1g007938m |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
NAC |
Protein Properties |
Length: 585aa MW: 66345.7 Da PI: 6.2652 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g007938m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 180.1 | 5.7e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
lppGfrFhPtdeelv +yLk+k++g+++el e+i+evd+yk+ePw+Lp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd+
orange1.1g007938m 6 LPPGFRFHPTDEELVAYYLKRKINGREIEL-EIIPEVDLYKCEPWELPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDR 96
79****************************.99***************6434555777********************************** PP
NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+v s +++ vg+kktLv+y+grap+g +t+Wvmheyrl
orange1.1g007938m 97 KVNS-QTRSVGMKKTLVYYRGRAPHGIRTHWVMHEYRL 133
****.9999***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 585 aa
Download sequence Send
to blast |
MAPVSLPPGF RFHPTDEELV AYYLKRKING REIELEIIPE VDLYKCEPWE LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QTRSVGMKKT LVYYRGRAPH 120 GIRTHWVMHE YRLDERECET DSGLQDAYAL CRVFKKSAIG PKIVEHYAPT PITTANQMTH 180 HPNSPSIEYY SESSDYPMPY DRCLPSNIGT ESSNQAHDGK WTQFLSEDSF GLNSTTPFSN 240 YATTPYHPCK IDVALECAKL QHRLSLPPLE VEDFSHQIGV TDFKMQHHSH ALTQQELMIN 300 QSSGVQDPWG GNYSNAAADD FSFMMTSDDN HYYDPSNNNN NNGMTSVRYN DKLWEGFNSR 360 SIEIGYLDED VKSERMVENL RWVGMSNKDL DKLNDFSLGF IDDEPNKNHL EEEIGDGTLA 420 SSPSFEVVEE IKVNHGMFVS TRQAADTFFH QIVPSQIVQV QLNRAEVANN LSINAKAEKF 480 TGTFMKPWKE IASAVVCMLV LVIMHGFYYL GENLDNGKLN IDDRFNVKEK GCSSKKIKEG 540 DLLVNIRGGR GDNFIVCLKK IGLFLTISLA LCTMWANHVV VSSA*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-56 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-56 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-56 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-56 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-56 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swm_B | 2e-56 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swm_C | 2e-56 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swm_D | 2e-56 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swp_A | 2e-56 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swp_B | 2e-56 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swp_C | 2e-56 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swp_D | 2e-56 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
4dul_A | 2e-56 | 1 | 162 | 12 | 171 | NAC domain-containing protein 19 |
4dul_B | 2e-56 | 1 | 162 | 12 | 171 | NAC domain-containing protein 19 |
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