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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
orange1.1g007598m |
Common Name | CISIN_1g007598mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
NAC |
Protein Properties |
Length: 597aa MW: 66622.4 Da PI: 4.6242 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g007598m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 168.1 | 3e-52 | 10 | 137 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
l+pGfrFhPtdeelv +yLk+kv +++l++ + i +diyk+ePwdLp k ++k+++kewyfFs dkky +g+r+nrat++gyWk+tgkd+
orange1.1g007598m 10 LAPGFRFHPTDEELVRYYLKRKVCHRSLRF-NPICVTDIYKSEPWDLPdKsSLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDR 100
579*************************99.88**************96357888999********************************** PP
NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+v++ ++++vg+kktLv++ grap+ge+t+Wvmheyrl
orange1.1g007598m 101 PVHH-NTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRL 137
****.999****************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009644 | Biological Process | response to high light intensity |
GO:0009962 | Biological Process | regulation of flavonoid biosynthetic process |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005737 | Cellular Component | cytoplasm |
GO:0016021 | Cellular Component | integral component of membrane |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 597 aa
Download sequence Send
to blast |
MGREFASTSL APGFRFHPTD EELVRYYLKR KVCHRSLRFN PICVTDIYKS EPWDLPDKSS 60 LKTRDKEWYF FSMLDKKYGN GSRTNRATEK GYWKTTGKDR PVHHNTRTVG MKKTLVYHMG 120 RAPHGERTNW VMHEYRLTDD DLEKAGVAQV RSWRTLFGIC VFICIVLVFD QLSLSLFFFL 180 VFLQLVEIDW LLVVLGKDTF VLCRIFQKSG SGPKNGEQYG APFIEEEWED DEAVDAALVP 240 GHDVVADELV VSDDAYFETN DLDQNIDVAN QSENAPRHLN FYHGESSNHV EHSRDLSPDN 300 QKPMIGVGAT QHNSELMDAR PVKDEYIDSS NGVNAGGVNY FLNEPYLDAT DNPQFSDGLY 360 LEANDLSSTV EADSQGFDMV EEYLNFFDAN DDNSEYLTFD ASEILGSGDN NSDQVPLTTE 420 VTEVTDQMSM AGQHQVEVHG NDVASTSEQK PDIVKSESDV KYPFLKQASQ MLGNVAAAPA 480 FASEFPTKDA ALRLNSLAHP SSSVHVTAGM IRIRNITLSG SGLDWSVGKN GDMNIVFSFD 540 LSQNVISPSP TSFEPAGNIF SGKTGSVVFR SLWLLLFLWI IILSVGFKIG ACVSAK*
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