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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
mrna27406.1-v1.0-hybrid |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family |
GATA |
Protein Properties |
Length: 310aa MW: 34269.3 Da PI: 4.8761 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
mrna27406.1-v1.0-hybrid | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 49.5 | 5.9e-16 | 166 | 202 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35
C++Cg ++ Tp +Rrgp+g+++LCnaCGl+++ kg+
mrna27406.1-v1.0-hybrid 166 CQHCGISEksTPAMRRGPNGPRSLCNACGLRWANKGT 202
*****99999************************997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0005515 | Molecular Function | protein binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 310 aa
Download sequence Send
to blast |
MEAVDVEPIQ ARPYEGEESE GEAAVSRTSE LTIAFEGEVF VFPAVTPDKV RAVLLLLGAR 60 DIPASHIPSS VPSSGFSLQQ NSMGIGDISR NSKLSRRFAS LVRFREKRKE RCFDKKIRYT 120 CRKDIAERMH RKNGQFASLK DPFKPVAGNC DSSDSTSCPE SVLRRCQHCG ISEKSTPAMR 180 RGPNGPRSLC NACGLRWANK GTLRDLTKAG RDISFDQNEL ESPEENKPIA LNAEVPPLRL 240 GDQDMLETTE AGRNQVSIQM ENSSVNLDEQ ENLDELANAS GTTFEIPANF EEQVVDFYDC 300 NMETNWGGT*
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