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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
mrna26139.1-v1.0-hybrid |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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| Family |
bHLH |
| Protein Properties |
Length: 583aa MW: 63894.1 Da PI: 8.0325 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| mrna26139.1-v1.0-hybrid | genome | GDR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 29.1 | 1.7e-09 | 267 | 322 | 2 | 55 |
HHHHHHHHHHHHHHHHH......HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 2 rrahnerErrRRdriNs......afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
r +h++ E+rRR s +f+ Lrel+P++ ++K +Ka+ L +++eYI++Lq
mrna26139.1-v1.0-hybrid 267 RSKHSATEQRRRTSNTStlkiiiRFQMLRELIPHS----DQKRDKASFLLEVIEYIQYLQ 322
889*********964443333339**********9....9*******************9 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006351 | Biological Process | transcription, DNA-templated |
| GO:0009742 | Biological Process | brassinosteroid mediated signaling pathway |
| GO:1902448 | Biological Process | positive regulation of shade avoidance |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 583 aa
Download sequence Send
to blast |
MELPQPRPFG GEGRKPTHDF LSLYSSHSTA QQDPRPPSQG GFLETHDFLQ PLERMGNACA 60
KEETSVETVS PSRSSVEKPA CVAQRPASVE HILPGGIGTY SISHISYFNQ RVPKPEENVF 120
PVAPQASSSH HERNDENSNC SSYAGSGFTL WDESAAKKGK TGKENVAERP GLRGQWTSSE 180
RPSQSSSTNN RNCFSSQSSG QKNLSFMEMM KSAAKGCTQE DELADEEEFA LKKEMSTTTT 240
TATTPYNGEL RVKVDAKSSD QKANTPRSKH SATEQRRRTS NTSTLKIIIR FQMLRELIPH 300
SDQKRDKASF LLEVIEYIQY LQEKVTKYEV PYQGWNQDPA KLMPWHGIEQ VNNQKLGESY 360
CDQSRGMNGG PAPALVFAAA KFEEKSSSVS PTIPGSAQKP VESDTSTETT FRAKDHQSGI 420
TNKAIPFPLS MQSNFLTPVR SGSSAPPFPP RLPSDSDNTS SHTRSMLFPT KTCTADAGVI 480
SDKLKEHELT IEGGRINISS AYSQGLLNTL TQALQNSGVD LSQANISVQI ELGKQACSRM 540
AIPKSIVKEN EIPSMTPGNK HSRISVGEDS EQAQKKLRTG RN*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Positive brassinosteroid-signaling protein. Transcription factor that bind specifically to the DNA sequence 5'-CANNTG-3'(E box). Can bind individually to the promoter as a homodimer or synergistically as a heterodimer with BZR2/BES1. Does not itself activate transcription but enhances BZR2/BES1-mediated target gene activation. {ECO:0000269|PubMed:15680330}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by cold treatment. {ECO:0000269|PubMed:12679534}. |
