PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID mrna24912.1-v1.0-hybrid
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family C2H2
Protein Properties Length: 135aa    MW: 15420 Da    PI: 4.3225
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
mrna24912.1-v1.0-hybridgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.45.9e-0683103222
                              EETTTTEEESSHHHHHHHHHH CS
                  zf-C2H2   2 kCpdCgksFsrksnLkrHirt 22 
                              +C+ Cg+++ +   L++H+++
  mrna24912.1-v1.0-hybrid  83 VCNFCGRRYETAAALEKHQKK 103
                              7******************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MASLAGGEWR RSGGGDFLVE EAVNEDDEVV EEVEDEDDDE LVEEVVNEDD ETVEEEVEDE  60
DDDELVEEEA KKKKKKKKKD GVVCNFCGRR YETAAALEKH QKKYRMSYYK ICGKCKNKLL  120
CKGDYEVHRR GCKG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17078KKKKKKKKK
27278KKKKKKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapmrna24912.1-v1.0-hybrid
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3447622