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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
mrna24339.1-v1.0-hybrid |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family |
GRAS |
Protein Properties |
Length: 440aa MW: 47857.3 Da PI: 6.0546 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
mrna24339.1-v1.0-hybrid | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 379.6 | 3.9e-116 | 77 | 436 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88
lLl+cAe+v+ ++l+ a+ lL ++sel+sp g++ +R+ ayf+ AL++r+ +s+ ++y+ l++++ + +s++ ++al+ ++ +s
mrna24339.1-v1.0-hybrid 77 GLLLQCAECVAMDNLHDASDLLPEISELSSPFGSSPERVGAYFAHALQTRVISSCLGTYSPLTTKTLTAAQSQRIFNALQSYNSIS 162
58************************************************************************************ PP
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgv 174
P++kfsh+taNqaI +a+ege++vH+iD+di+qGlQWp L++ LasR+++ s+RiTg+gs s+e le+tg+rLa+fA++lg+
mrna24339.1-v1.0-hybrid 163 PLVKFSHFTANQAIFQALEGEDHVHVIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGS----STELLESTGRRLADFASSLGL 244
*************************************************************....99******************* PP
GRAS 175 pfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflea 260
pfef++l k + el++L +++ Ea++V++++ h l+d ++s +L+ + l+Pk+++vveq+++h s+sFl rf+ea
mrna24339.1-v1.0-hybrid 245 PFEFHPLEGKIGSVAELSQLGIRSSEATVVHWMH--HCLYDVTGSDLA----TLRSLSLLRPKLITVVEQDLSH-SGSFLGRFVEA 323
******988888888******************9..888877777777....**********************.899******** PP
GRAS 261 leyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvks 346
l+yysalfd+l +l ++s er++vE++l+g ei+n++a g +r+ + + +e+W e l+++GF+pv+l+ + a+qa+lll ++++
mrna24339.1-v1.0-hybrid 324 LHYYSALFDALGDGLNADSLERHMVEQQLFGCEIRNILAVGGPKRTGEVK-VERWGEELKRVGFRPVSLGGNPAAQASLLLGMFPW 408
********************************************998887.9********************************** PP
GRAS 347 dgyrveeesgslvlgWkdrpLvsvSaWr 374
+gy++ ee+g+l lgWkd +L+++SaW+
mrna24339.1-v1.0-hybrid 409 KGYTLVEENGCLKLGWKDLSLLTASAWQ 436
***************************6 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 440 aa
Download sequence Send
to blast |
MLQSLVPQSP IVTNPKNPTS SSSSSMKTKR VDRDDPDSAA DDPSSFTTKR PTFSREPTAE 60 PVEPVAEGES AGLKLLGLLL QCAECVAMDN LHDASDLLPE ISELSSPFGS SPERVGAYFA 120 HALQTRVISS CLGTYSPLTT KTLTAAQSQR IFNALQSYNS ISPLVKFSHF TANQAIFQAL 180 EGEDHVHVID LDIMQGLQWP GLFHILASRS KKIRSMRITG FGSSTELLES TGRRLADFAS 240 SLGLPFEFHP LEGKIGSVAE LSQLGIRSSE ATVVHWMHHC LYDVTGSDLA TLRSLSLLRP 300 KLITVVEQDL SHSGSFLGRF VEALHYYSAL FDALGDGLNA DSLERHMVEQ QLFGCEIRNI 360 LAVGGPKRTG EVKVERWGEE LKRVGFRPVS LGGNPAAQAS LLLGMFPWKG YTLVEENGCL 420 KLGWKDLSLL TASAWQPSD*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |