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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
mrna23715.1-v1.0-hybrid |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family |
bHLH |
Protein Properties |
Length: 584aa MW: 66027.7 Da PI: 5.1077 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
mrna23715.1-v1.0-hybrid | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 44.1 | 3.6e-14 | 337 | 380 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
+Er+RR+++N+++ +Lr+l+P+ + K++Ka+iL+ A++Y+k+Lq
mrna23715.1-v1.0-hybrid 337 VAERKRRKKLNEKLYKLRSLVPNiS------KMDKASILKDAIDYVKDLQ 380
68*********************66......******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 584 aa
Download sequence Send
to blast |
MDSLFSSRIS LVLELIPCVT GILQLVMYIA GVMNMTMYNL IIERLRPLVG LKGWDYCVLW 60 KLSEDQRFIE WIGCCCSGID EDSQNGGQEL LFPVYQVFRC RDTMQHSRTS SCDILASLPS 120 SMPLDSGIYA KTIMSNQPCW LNCSSSNSDS SAMLERDGTR VLVPTAGGLM IELFVSKDVF 180 EDQHVIDFIT AQCNIWREQD TLISASNTCS TNTPVLSPSM ASLDPHDVNL PYDITVDRIH 240 LCSSESSSPL NFLQHVTSYN SENRMKNSPS ACTYNQGNSH EYSLDQPLEN MEQQGTLDDQ 300 DSIKQADHSA SDCSDQTDEN TNYKRRNGKE PQSKNLVAER KRRKKLNEKL YKLRSLVPNI 360 SKMDKASILK DAIDYVKDLQ RQVKELQDVL EDNSNGGGAK RTFNSISGNY NNYQSENQHG 420 ISMANKTESD KPQNGFHDSD HNTNEMGQQQ MEPQVGVTQL DGNEFFVTVF CEQKPEGFVR 480 LMEALDSLGL EVTNANVTSF RSLVSNVFKV EKRDSEILQA DEVRDSLLEI TRNPSKGYWP 540 EMAKAKASGN DRSLDYDHDN KHHYHHHLHN YHNSTCHLQH LYD*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 323 | 344 | KRRNGKEPQSKNLVAERKRRKK |
2 | 338 | 345 | ERKRRKKL |