PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | mrna13336.1-v1.0-hybrid | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | C2H2 | ||||||||
Protein Properties | Length: 102aa MW: 11460.9 Da PI: 9.106 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.3 | 0.00012 | 71 | 95 | 1 | 21 |
EEETTTT....EEESSHHHHHHHHH CS zf-C2H2 1 ykCpdCg....ksFsrksnLkrHir 21 ++C+ C +sF ++++L++H mrna13336.1-v1.0-hybrid 71 FVCGVCEtipkRSFITQHDLTQHKI 95 89*********************75 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence Send to blast |
MVRPRNNNKN QRSKNQEENQ EKPSAMCKSC NTEARAEDIE AHVKFGCENS MKQASRVATI 60 EISSDGKKKV FVCGVCETIP KRSFITQHDL TQHKIDKHGT Q* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | mrna13336.1-v1.0-hybrid |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Link Out ? help Back to Top | |
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Phytozome | mrna13336.1-v1.0-hybrid |