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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
mrna08765.1-v1.0-hybrid |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family |
NAC |
Protein Properties |
Length: 353aa MW: 39095.8 Da PI: 9.1098 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
mrna08765.1-v1.0-hybrid | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 177.9 | 2.7e-55 | 13 | 140 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86
lppGfrFhPtdeel+++yL +k+++ +++ ++i++vd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+t
mrna08765.1-v1.0-hybrid 13 LPPGFRFHPTDEELITYYLMNKISDATFTG-RAIADVDLNKCEPWELPAKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTT 97
79*************************999.89***************99999********************************* PP
NAM 87 gkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
gkdke++++ ++elvg+kktLvfy+grap+gek++Wvmheyr+
mrna08765.1-v1.0-hybrid 98 GKDKEIFNSaTSELVGMKKTLVFYRGRAPRGEKSNWVMHEYRI 140
*******9878899***************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MSTGDHANKE DNLPPGFRFH PTDEELITYY LMNKISDATF TGRAIADVDL NKCEPWELPA 60 KAKMGEKEWY FFSLRDRKYP TGVRTNRATN TGYWKTTGKD KEIFNSATSE LVGMKKTLVF 120 YRGRAPRGEK SNWVMHEYRI HSKSSFRPSK DEWVVCRVFQ KSAGVKKYPP SNQSSSSSRG 180 ANPYNMELMG PSVNVVQSPI MQLGHEHQFP NYGRSYMTNA EMAELSRVLR GGGVATGSTS 240 SPMNLPLLQP QFSYPNLGGG GFTISGLNLN LGGPSTQSNL RPMSGIHQAH QAMNNHQDVA 300 NSSMMTSAGG AVGQDQAGYG NIDMNNGNVP AGNRYMNMVD QCVDLDHYWP SY*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 7e-55 | 12 | 167 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 7e-55 | 12 | 167 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 7e-55 | 12 | 167 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 7e-55 | 12 | 167 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
4dul_A | 7e-55 | 12 | 167 | 16 | 171 | NAC domain-containing protein 19 |
4dul_B | 7e-55 | 12 | 167 | 16 | 171 | NAC domain-containing protein 19 |
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