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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
mrna05722.1-v1.0-hybrid |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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| Family |
LBD |
| Protein Properties |
Length: 251aa MW: 27016.7 Da PI: 8.2674 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| mrna05722.1-v1.0-hybrid | genome | GDR | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 101.4 | 8.5e-32 | 2 | 103 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvil 81
+C++C+vlr++C+++C+l+p++ p++q +++ +v+k+FG++ ++++++a+pe++r+ +++sl++eA+ r+ +Pv+Gavg+++
mrna05722.1-v1.0-hybrid 2 SCNGCRVLRKGCSESCILRPCLqwietPEAQGHATVFVAKFFGRAGLMSFISAVPESQRPVLFQSLLFEACGRTVNPVNGAVGLLW 87
6************************************************************************************* PP
DUF260 82 klqqqleqlkaelall 97
++++q++q+++e++l+
mrna05722.1-v1.0-hybrid 88 TGNWQVCQAAVETVLR 103
**********999876 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCSESCILR PCLQWIETPE AQGHATVFVA KFFGRAGLMS FISAVPESQR 60
PVLFQSLLFE ACGRTVNPVN GAVGLLWTGN WQVCQAAVET VLRGGTLRPI PELVSGSGSG 120
LTPDEASEAD GTVCTDMWRL RDPTHNSGTS SRFTNSRSKT ASCSPTTKRK RPDGESLKAL 180
QHADLDLRLT PTLAFRPKPK PDTRRPGSPS MNSEESVVTT CFESNGFAEQ YPNPNGGVLG 240
SEIKLLNLFP *
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