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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
maker-scaffold16081-augustus-gene-0.6-mRNA-1 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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| Family |
NAC |
| Protein Properties |
Length: 177aa MW: 20729.7 Da PI: 9.6774 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| maker-scaffold16081-augustus-gene-0.6-mRNA-1 | genome | THGP | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 121.5 | 7.5e-38 | 9 | 150 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFsk 63
lppG+rF+P+d e++ yLkkk++g++ ++ +i+ ++ yk ePw+Lpk +++++++ew+fF++
maker-scaffold16081-augustus-gene-0.6-mRNA-1 9 LPPGVRFSPKDLEVIELYLKKKITGNDEDT-WFIPVIEFYKDEPWNLPKksRIDTKDQEWFFFTE 72
79*************************888.78**************95357788999******* PP
NAM 64 rdkkya...........tgkrknratksgyWkatgkdkevlskkgelvglkktLvfy...kgrap 114
++ k++ +++r nr+tk+gyWk+tg+d+e++s +++l+g+kktLvf+ ++ ++
maker-scaffold16081-augustus-gene-0.6-mRNA-1 73 QSLKHQddnpkkrkrdqKQERVNRKTKAGYWKSTGTDREIKS-GESLIGMKKTLVFHtgtTKGKE 136
9999985555555444444477888*****************.999***********55434678 PP
NAM 115 kgektdWvmheyrl 128
kg t+Wvmhey+
maker-scaffold16081-augustus-gene-0.6-mRNA-1 137 KGIGTKWVMHEYST 150
8999********85 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 177 aa
Download sequence Send
to blast |
MEKLSLDHLP PGVRFSPKDL EVIELYLKKK ITGNDEDTWF IPVIEFYKDE PWNLPKKSRI 60
DTKDQEWFFF TEQSLKHQDD NPKKRKRDQK QERVNRKTKA GYWKSTGTDR EIKSGESLIG 120
MKKTLVFHTG TTKGKEKGIG TKWVMHEYST TQKDFDGKHP GQVGFCYSIC LIDVILT
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 4e-26 | 2 | 148 | 10 | 140 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 4e-26 | 2 | 148 | 10 | 140 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 4e-26 | 2 | 148 | 10 | 140 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 4e-26 | 2 | 148 | 10 | 140 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 5e-26 | 2 | 148 | 13 | 143 | NAC domain-containing protein 19 |
| 3swm_B | 5e-26 | 2 | 148 | 13 | 143 | NAC domain-containing protein 19 |
| 3swm_C | 5e-26 | 2 | 148 | 13 | 143 | NAC domain-containing protein 19 |
| 3swm_D | 5e-26 | 2 | 148 | 13 | 143 | NAC domain-containing protein 19 |
| 3swp_A | 5e-26 | 2 | 148 | 13 | 143 | NAC domain-containing protein 19 |
| 3swp_B | 5e-26 | 2 | 148 | 13 | 143 | NAC domain-containing protein 19 |
| 3swp_C | 5e-26 | 2 | 148 | 13 | 143 | NAC domain-containing protein 19 |
| 3swp_D | 5e-26 | 2 | 148 | 13 | 143 | NAC domain-containing protein 19 |
| 3ulx_A | 4e-26 | 8 | 148 | 14 | 138 | Stress-induced transcription factor NAC1 |
| 4dul_A | 4e-26 | 2 | 148 | 10 | 140 | NAC domain-containing protein 19 |
| 4dul_B | 4e-26 | 2 | 148 | 10 | 140 | NAC domain-containing protein 19 |
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