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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
maker-scaffold14007-snap-gene-0.9-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
GeBP |
Protein Properties |
Length: 272aa MW: 30463.9 Da PI: 5.1791 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold14007-snap-gene-0.9-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 123.8 | 8.2e-39 | 125 | 222 | 1 | 98 |
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkv 69
klfqrlws+e ei lL+G++d++a +g++p +d af+efvkks++++v+k qlv+K++rL+kK++++
maker-scaffold14007-snap-gene-0.9-mRNA-1 125 KLFQRLWSDENEIELLKGMLDYTALRGADPAADAAAFFEFVKKSLHVEVTKAQLVDKMKRLRKKYNNNA 193
579****************************************************************** PP
DUF573 70 kkaksgkepsfskehdqkifelskkiWgs 98
+ k+gk+p+fsk+h+qk++elskkiWgs
maker-scaffold14007-snap-gene-0.9-mRNA-1 194 GRGKKGKDPTFSKPHEQKTYELSKKIWGS 222
***************************95 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MAPKRPSHLD DPPAASSSEE EEEEETSSED EEEEEEGESS SEEEEHKAEA AKIDSLPSTP 60 ATKPRSKPSS ARSSAATKKR PNGEAEATPS KRVKKKDPEP KSQDAVVSPS EDSKKGGGGG 120 GDEKKLFQRL WSDENEIELL KGMLDYTALR GADPAADAAA FFEFVKKSLH VEVTKAQLVD 180 KMKRLRKKYN NNAGRGKKGK DPTFSKPHEQ KTYELSKKIW GSSVWLDERV IKRGLKLIDE 240 EKKVELEERW KEVELAELEL FVKRTELIKD QA
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT4G00390.1 | 1e-27 | DNA-binding storekeeper protein-related transcriptional regulator |