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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
maker-scaffold13586-augustus-gene-0.8-mRNA-1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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| Family |
NAC |
| Protein Properties |
Length: 171aa MW: 19899.6 Da PI: 9.2522 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| maker-scaffold13586-augustus-gene-0.8-mRNA-1 | genome | THGP | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 124.4 | 9.3e-39 | 9 | 150 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFsk 63
lppG+rF+P+d e++ yLkkk++g++ ++ +i+e++ yk ePwdLp k +++e++ew+fF++
maker-scaffold13586-augustus-gene-0.8-mRNA-1 9 LPPGVRFSPKDPEVIELYLKKKITGNDEDT-WFIPEIEFYKDEPWDLPiKsGIATEDQEWFFFTE 72
79*************************888.78**************96347777999******* PP
NAM 64 rdkkya...........tgkrknratksgyWkatgkdkevlskkgelvglkktLvfy...kgrap 114
++ k++ +++r +r+tk+gyWk+tg+d+e++s +++l+g+kktLvf+ ++ ++
maker-scaffold13586-augustus-gene-0.8-mRNA-1 73 QSLKQQddnpkkrkrdqKQERVSRKTKAGYWKSTGTDREIKS-GESLIGMKKTLVFHigtTKGKE 136
*999994444433333223355555*****************.999***********76655778 PP
NAM 115 kgektdWvmheyrl 128
kg t+Wvmhey+
maker-scaffold13586-augustus-gene-0.8-mRNA-1 137 KGIGTKWVMHEYST 150
999*********85 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 171 aa
Download sequence Send
to blast |
MEKLSLDHLP PGVRFSPKDP EVIELYLKKK ITGNDEDTWF IPEIEFYKDE PWDLPIKSGI 60
ATEDQEWFFF TEQSLKQQDD NPKKRKRDQK QERVSRKTKA GYWKSTGTDR EIKSGESLIG 120
MKKTLVFHIG TTKGKEKGIG TKWVMHEYST TQKDFDGKHP GQIVLPPKSL E
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-26 | 9 | 148 | 17 | 140 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-26 | 9 | 148 | 17 | 140 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-26 | 9 | 148 | 17 | 140 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-26 | 9 | 148 | 17 | 140 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-26 | 4 | 148 | 15 | 143 | NAC domain-containing protein 19 |
| 3swm_B | 2e-26 | 4 | 148 | 15 | 143 | NAC domain-containing protein 19 |
| 3swm_C | 2e-26 | 4 | 148 | 15 | 143 | NAC domain-containing protein 19 |
| 3swm_D | 2e-26 | 4 | 148 | 15 | 143 | NAC domain-containing protein 19 |
| 3swp_A | 2e-26 | 4 | 148 | 15 | 143 | NAC domain-containing protein 19 |
| 3swp_B | 2e-26 | 4 | 148 | 15 | 143 | NAC domain-containing protein 19 |
| 3swp_C | 2e-26 | 4 | 148 | 15 | 143 | NAC domain-containing protein 19 |
| 3swp_D | 2e-26 | 4 | 148 | 15 | 143 | NAC domain-containing protein 19 |
| 4dul_A | 2e-26 | 9 | 148 | 17 | 140 | NAC domain-containing protein 19 |
| 4dul_B | 2e-26 | 9 | 148 | 17 | 140 | NAC domain-containing protein 19 |
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