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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
maker-scaffold12866-augustus-gene-0.2-mRNA-2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
bHLH |
Protein Properties |
Length: 477aa MW: 50787.8 Da PI: 6.5999 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold12866-augustus-gene-0.2-mRNA-2 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 36.9 | 6.7e-12 | 260 | 305 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq
maker-scaffold12866-augustus-gene-0.2-mRNA-2 260 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 305
99***********************8.....6******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 477 aa
Download sequence Send
to blast |
MQGMNSLLNP TQISLQDLQN HHHQQQQQQQ HQQQPQQIQN SQIQHLHNSH FDPNNTHDDF 60 LEQMFSAIPS CSWPDLNPKT PWDLKPRDLS DETPPSNPDN NVPYQFDHDS STLASKLRNH 120 QISGATKSSA AAAAAALMLQ QQLFMSRGAG ESGLIQMPLS LGASDDVVDG SSSFKSPNTG 180 GEGSVQALYN GFTGSLHGPG QTPNQAQHFH HPQGGQVQGQ NYGAPSGVMN QGPASGSAGS 240 APAQPRQRVR ARRGQATDPH SIAERLRRER IAERMKALQE LVPNANKTDK ASMLDEIIDY 300 VKFLQLQVKV LSMSRLGGAA AVAPLVADMS SEGGGDCIQA GTNSGALGRN SNGNQTASSN 360 DSLTVTEHQV AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN AMINNHNSNS 420 SNNNNNNVNN NSNNPLLQSN GEGPSSPSMS VLTVQSATMG NGGGDASVKD NTSVSKP
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Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By cold, UV, ethylene (ACC), flagellin, jasmonic acid (JA), and salicylic acid (SA) treatments. {ECO:0000269|PubMed:12679534}. |