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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
maker-scaffold12160-augustus-gene-0.5-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
CO-like |
Protein Properties |
Length: 406aa MW: 44516.4 Da PI: 4.9912 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold12160-augustus-gene-0.5-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 19 | 2.9e-06 | 5 | 44 | 6 | 39 |
zf-B_box 6 CpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
C+ ++e++ +C+++ +lC +C + H+ H++
maker-scaffold12160-augustus-gene-0.5-mRNA-1 5 CDFCGEQRSMVYCRSDAACLCLSCDRNVHSAnalskrHSR 44
*****************************65677777765 PP
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2 | zf-B_box | 23.6 | 1.1e-07 | 46 | 89 | 4 | 41 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvvp 41
C++++++++ C + + lC++C ++H g H++++
maker-scaffold12160-augustus-gene-0.5-mRNA-1 46 LLCERCNSQPALVRCAEEKLSLCQNCDWTGH-GaststssHKRQT 89
57*****************************.5588888898876 PP
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3 | CCT | 62.4 | 1.4e-21 | 349 | 392 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
R a++RYkeK+ktRkFeK++rY+sRKa+A+ R+RvKGrFvk+
maker-scaffold12160-augustus-gene-0.5-mRNA-1 349 RSDAVMRYKEKKKTRKFEKRVRYASRKARADVRKRVKGRFVKAG 392
889**************************************985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 406 aa
Download sequence Send
to blast |
MGYLCDFCGE QRSMVYCRSD AACLCLSCDR NVHSANALSK RHSRTLLCER CNSQPALVRC 60 AEEKLSLCQN CDWTGHGAST STSSHKRQTI NCYSGCPSAA ELSSIWSFVL DSPSVGESTC 120 EQEMGLMSLT ENGEKNAWGP SENNMSQNVS SSVELNDVRG MDKSNVWVAS SLAPAVNSTP 180 HILDQPVGPS KASLPKLCCP GTKDSELSEE NDFYDDFNMD EVDLNFENYE ELFGVSLSHS 240 EELFENGGID SLFGMKEMSA AEGSSVGHFN STQPACSNAA SADSIVSTKT EPILCFTARQ 300 GQSNLSFSGL TGESSPGDYQ DCGASSMLLM GEPPWCPPCP ENSFQSANRS DAVMRYKEKK 360 KTRKFEKRVR YASRKARADV RKRVKGRFVK AGENYDYDPL SQTRSY
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