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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
maker-scaffold11982-snap-gene-0.6-mRNA-1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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| Family |
FAR1 |
| Protein Properties |
Length: 458aa MW: 53786.4 Da PI: 4.9155 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| maker-scaffold11982-snap-gene-0.6-mRNA-1 | genome | THGP | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 71.5 | 2e-22 | 101 | 185 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvk 69
++Yn YA+e+GF +r+++s ++++++e + ++C++eg++ ++ + ++r+etrtgC a+++++
maker-scaffold11982-snap-gene-0.6-mRNA-1 101 NYYNCYARELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKMIKEAN-----SRRKETRTGCLAMIRLR 164
69****************************************98887.....8999************* PP
FAR1 70 kekdgkwevtkleleHnHela 90
+ ++++w+v++++leHnH++
maker-scaffold11982-snap-gene-0.6-mRNA-1 165 LVESNRWRVDEVKLEHNHSFD 185
******************986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 458 aa
Download sequence Send
to blast |
MVCFLYQIEE GSQNSDQLLE HDGDLENDHE TEQLFEIDGD DHEGNDLENE CEQLFEIEGN 60
DLETDRDDTT IVDFQNGISE RKDYPPPVVG MEFESYDDAY NYYNCYAREL GFAIRVKSSW 120
TKRNSKEKRG AVLCCNCEGF KMIKEANSRR KETRTGCLAM IRLRLVESNR WRVDEVKLEH 180
NHSFDPERAQ NSKSHKKMVI GDKRKLEPTV DVEVRTIKLY RTPVVDAMGY GSSNSNEGEA 240
NNHFDQFFHM YEIVLQKKHQ KEALDDLESR DSSDILKTSC YYELQLSKLY TKEIFQKFQD 300
EVVMMSSCFN ITQAHTNGPV VTYMVKERDG EEILRDVRNF EVMYDKATAE VRCICSCFNF 360
KGYLCRHALC VLTYNGLEEI PFQYILSRWR KDFKRLYVPD LGSNNVDITN PVQWFDHLYR 420
RAMQVVEEGM ISQDHYMVAW QAFKESLNKV RLVAEKHM
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Putative transcription activator involved in regulating light control of development. May have a role in controlling flowering time. {ECO:0000269|PubMed:15591448}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |
